C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021745 Ptprg 10090 + 14:11553532-12242041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022264 Ptprg-001 11553532-12242041 protein_coding
  ENSMUST00000119888 Ptprg-004 12189943-12238563 protein_coding
  ENSMUST00000134290 Ptprg-005 12218946-12223556 processed_transcript
  ENSMUST00000142917 Ptprg-002 11553553-12238564 nonsense_mediated_decay
  ENSMUST00000148113 Ptprg-003 11553581-11964131 retained_intron
  ENSMUST00000155727 Ptprg-006 12091160-12122132 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022264ENSMUST00000119888ENSMUST00000142917ENSMUST00000148113ENSMUST00000155727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022264 4.148±0.54 8.968±2.71 2.973±0.40 6.075±2.97 1.866±0.61 1.782±0.60 2.553±0.04 3.043±0.92 1.175±0.80 7.921±0.34 1.499±0.55 5.731±2.30 1.293±0.20 0.432±0.07
ENSMUST00000119888 N/A N/A N/A N/A N/A N/A 2.929±0.00 N/A 0.341±0.06 N/A N/A 4.922±0.00 0.938±0.00 1.216±0.00
ENSMUST00000142917 6.214±1.08 8.930±1.55 N/A 3.190±1.62 3.846±0.83 3.533±1.22 3.387±0.70 4.570±1.24 1.134±0.74 8.845±1.69 N/A 16.852±7.39 0.844±0.27 1.033±0.53
ENSMUST00000148113 N/A 10.469±0.25 N/A N/A 7.556±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155727 N/A N/A N/A N/A 27.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QX CIL_0008QX_0002 VISTA 14:11475621-12079078
CIL_00034G CIL_00034G_0002 CGP 14:11553532-12303231

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005615 IEA extracellular space
GO:0007420 IEA brain development
GO:0010633 IEA negative regulation of epithelial cell migration
GO:0010977 IEA negative regulation of neuron projection development
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0042802 IEA identical protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045006 ptprga protein tyrosine phosphatase, receptor type, g a protein_coding Danio_rerio
ENSDARG00000060123 ca16b carbonic anhydrase XVI b protein_coding Danio_rerio
ENSG00000144724 PTPRG protein tyrosine phosphatase, receptor type, G protein_coding Homo_sapiens

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