C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Kpna2 retrotransposed pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120025 Kpna2-ps-001 ENSMUSG00000083672 10090 - 17:47620771-47622339 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_0006L5 CIL_0006L5_0002 CGP 17:47599331-47624418
CIL_0006L6 CIL_0006L6_0002 CGP 17:47611589-47686738
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330459 KPNA2-001 protein_coding Homo_sapiens 0 1471
ENST00000415694 RP11-417L14.1-001 processed_pseudogene Homo_sapiens 0 215
ENST00000423226 AC073310.4-001 processed_pseudogene Homo_sapiens 0 514
ENST00000537025 KPNA2-002 protein_coding Homo_sapiens 0 1471
ENST00000584190 RP13-104F24.1-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 466

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