C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415694 RP11-417L14.1-001 ENSG00000226535 9606 - 9:107169569-107171148 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyOvaryPlacentaTestisENST00000415694
Transcript ID Breast Kidney Ovary Placenta Testis
ENST00000415694 0.015±0.00 0.008±0.00 0.014±0.00 0.088±0.00 0.094±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091289 Gm10259-001 processed_pseudogene Mus_musculus 0 1157
ENSMUST00000018506 Kpna2-001 protein_coding Mus_musculus 0 1157
ENSMUST00000145331 Kpna2-007 nonsense_mediated_decay Mus_musculus 0 1157
ENSMUST00000086423 Gm10184-201 protein_coding Mus_musculus 0 1157
ENSMUST00000119855 Gm12919-001 processed_pseudogene Mus_musculus 0 1077
ENSMUST00000121704 Gm5832-001 processed_pseudogene Mus_musculus 0 1066
ENSMUST00000121510 Gm16436-001 processed_pseudogene Mus_musculus 0 1033
ENSMUST00000118899 Gm4991-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000120962 Gm13310-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000120025 Kpna2-ps-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000138638 Med20-003 retained_intron Mus_musculus 0 215

Loading