C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120184 Amy2b-001 ENSMUSG00000083079 10090 - 3:113147656-113156727 unprocessed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverMusclePlacentaENSMUST00000120184
Transcript ID Adipose Bladder Brain Breast Colon Liver Muscle Placenta
ENSMUST00000120184 0.041±0.00 0.005±0.00 0.011±0.01 0.060±0.00 3.216±1.98 0.037±0.03 0.013±0.00 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330330 AMY1B-201 protein_coding Homo_sapiens 0 1498
ENST00000361355 AMY2B-001 protein_coding Homo_sapiens 0 1515
ENST00000370079 AMY1C-001 protein_coding Homo_sapiens 0 1498
ENST00000370080 AMY1B-001 protein_coding Homo_sapiens 0 1498
ENST00000370083 AMY1A-001 protein_coding Homo_sapiens 0 1498
ENST00000414303 AMY2A-001 protein_coding Homo_sapiens 0 1511
ENST00000423678 AMY2A-002 protein_coding Homo_sapiens 0 399
ENST00000430659 AMY1A-002 protein_coding Homo_sapiens 0 601
ENST00000438604 RP5-1108M17.5-001 unprocessed_pseudogene Homo_sapiens 1e-24 115
ENST00000440059 AMYP1-001 unprocessed_pseudogene Homo_sapiens 0 1062
ENST00000446703 AMY1B-002 protein_coding Homo_sapiens 0 601
ENST00000461518 AMY1A-004 retained_intron Homo_sapiens 0 680
ENST00000464691 AMY1B-004 processed_transcript Homo_sapiens 0 680
ENST00000477657 AMY2B-002 nonsense_mediated_decay Homo_sapiens 0 1101
ENST00000481821 AMY2B-007 processed_transcript Homo_sapiens 0 285
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 1101
ENST00000494409 AMY1A-005 processed_transcript Homo_sapiens 5e-38 161
ENST00000497748 AMY2A-003 processed_transcript Homo_sapiens 0 540
ENST00000610592 AMY1A-201 protein_coding Homo_sapiens 0 647
ENST00000610648 AMY2B-201 protein_coding Homo_sapiens 0 1515
ENST00000622339 AMY2A-201 protein_coding Homo_sapiens 0 1511

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