C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase, alpha 2B (pancreatic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491397 AMY2B-003 ENSG00000240038 9606 + 1:103568334-103579530 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Z CIL_00072Z_0002 CGP 1:102876467-103555239
CIL_0005I9 CIL_0005I9_0003 CGP 1:103553815-103625780

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 1325
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 1315
ENSMUST00000098667 Amy2a2-001 protein_coding Mus_musculus 0 1160
ENSMUST00000179314 Amy2a3-001 protein_coding Mus_musculus 0 1160
ENSMUST00000179568 Amy2a4-001 protein_coding Mus_musculus 0 1160
ENSMUST00000098673 Amy2a5-001 protein_coding Mus_musculus 0 1160
ENSMUST00000120184 Amy2b-001 unprocessed_pseudogene Mus_musculus 0 1101
ENSMUST00000067980 Amy1-001 protein_coding Mus_musculus 0 1072
ENSMUST00000106540 Amy1-002 protein_coding Mus_musculus 0 1070
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 904
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 881
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 881
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 839
ENSMUST00000142505 Amy1-003 protein_coding Mus_musculus 0 758
ENSMUST00000132353 Amy2a1-001 protein_coding Mus_musculus 0 741
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 671
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 665
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 627
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 610
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 566
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 538
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 449
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 429
ENSDART00000132497 actb2-006 retained_intron Danio_rerio 0 388
ENSDART00000134924 actb2-004 retained_intron Danio_rerio 0 215
ENSDART00000135971 actb2-005 retained_intron Danio_rerio 0 215
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 215
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 215
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 215
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 7e-16 92

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