C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amylase, alpha 1C (salivary)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370079 AMY1C-001 ENSG00000187733 9606 + 1:103750406-103758690 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005I9 CIL_0005I9_0004 CGP 1:103616811-103752946
CIL_0005I9 CIL_0005I9_0002 CGP 1:103655290-103752946
CIL_0005I9 CIL_0005I9_0001 CGP 1:103687415-103758690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004556 IEA alpha-amylase activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005975 IEA carbohydrate metabolic process
GO:0007586 TAS digestion
GO:0043169 IEA cation binding
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098667 Amy2a2-001 protein_coding Mus_musculus 0 1519
ENSMUST00000179314 Amy2a3-001 protein_coding Mus_musculus 0 1519
ENSMUST00000179568 Amy2a4-001 protein_coding Mus_musculus 0 1519
ENSMUST00000098673 Amy2a5-001 protein_coding Mus_musculus 0 1519
ENSMUST00000120184 Amy2b-001 unprocessed_pseudogene Mus_musculus 0 1498
ENSMUST00000067980 Amy1-001 protein_coding Mus_musculus 0 1496
ENSMUST00000106540 Amy1-002 protein_coding Mus_musculus 0 1495
ENSMUST00000142505 Amy1-003 protein_coding Mus_musculus 0 730
ENSMUST00000132353 Amy2a1-001 protein_coding Mus_musculus 0 684

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