C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13436
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120418 Gm13436-001 ENSMUSG00000083716 10090 - 2:36807826-36808392 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120418 35.334±11.86 11.007±2.15 0.267±0.05 1.805±1.73 18.774±8.95 14.045±2.89 7.569±0.79 10.436±3.99 3.309±2.50 13.075±1.20 0.132±0.00 19.967±15.13 0.123±0.05 10.392±0.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000084795 RPL18-006 protein_coding Homo_sapiens 0 678
ENST00000422478 RP11-709P2.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000478088 RPL18P13-001 processed_pseudogene Homo_sapiens 0 579
ENST00000497218 RP11-286B5.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000547892 RPL18-003 retained_intron Homo_sapiens 2e-24 119
ENST00000547897 RPL18-010 non_stop_decay Homo_sapiens 0 355
ENST00000549273 RPL18-014 protein_coding Homo_sapiens 0 575
ENST00000549370 RPL18-009 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000549920 RPL18-001 protein_coding Homo_sapiens 0 682
ENST00000550645 RPL18-012 protein_coding Homo_sapiens 0 357
ENST00000550671 RPL18-007 retained_intron Homo_sapiens 4e-26 122
ENST00000550973 RPL18-013 protein_coding Homo_sapiens 0 643
ENST00000551749 RPL18-004 retained_intron Homo_sapiens 0 255
ENST00000552347 RPL18-005 retained_intron Homo_sapiens 0 255
ENST00000552705 RPL18-002 retained_intron Homo_sapiens 0 361

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