C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12482
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120435 Gm12482-001 ENSMUSG00000081975 10090 + 4:52821488-52822117 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverOvaryPlacentaTestisENSMUST00000120435
Transcript ID Adipose Brain Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000120435 0.068±0.00 0.046±0.00 0.202±0.00 0.070±0.00 0.042±0.03 0.067±0.02 0.093±0.01 0.180±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356769 NACA-001 protein_coding Homo_sapiens 0 710
ENST00000359690 NACA3P-001 processed_pseudogene Homo_sapiens 0 643
ENST00000393891 NACA-003 protein_coding Homo_sapiens 0 710
ENST00000407371 NACAP7-001 processed_pseudogene Homo_sapiens 0 287
ENST00000419462 NACAP1-001 processed_transcript Homo_sapiens 0 606
ENST00000454682 NACA-201 protein_coding Homo_sapiens 0 610
ENST00000509572 NACAP6-001 processed_pseudogene Homo_sapiens 0 193
ENST00000509863 NACAP5-001 processed_pseudogene Homo_sapiens 0 440
ENST00000519039 NACAP1-002 transcribed_processed_pseudogene Homo_sapiens 0 606
ENST00000521764 NACA2-001 protein_coding Homo_sapiens 0 577
ENST00000546392 NACA-005 protein_coding Homo_sapiens 0 710
ENST00000546862 NACA-012 protein_coding Homo_sapiens 0 492
ENST00000547914 NACA-015 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000548084 NACA-013 nonsense_mediated_decay Homo_sapiens 6.99949e-42 174
ENST00000548563 NACA-011 protein_coding Homo_sapiens 0 652
ENST00000549259 NACA-007 protein_coding Homo_sapiens 0 710
ENST00000549855 NACA-020 protein_coding Homo_sapiens 0 459
ENST00000550920 NACA-018 protein_coding Homo_sapiens 0 610
ENST00000550952 NACA-004 protein_coding Homo_sapiens 0 610
ENST00000551520 NACA-009 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000551775 NACA-010 processed_transcript Homo_sapiens 0 244
ENST00000551793 NACA-008 processed_transcript Homo_sapiens 0 257
ENST00000552055 NACA-014 protein_coding Homo_sapiens 0 501
ENST00000552100 NACAP3-001 processed_pseudogene Homo_sapiens 0 455
ENST00000552540 NACA-002 protein_coding Homo_sapiens 0 710

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