C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenosine deaminase, tRNA-specific 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120457 Adat1-002 ENSMUSG00000031949 10090 - 8:111971553-111990412 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000120457
Transcript ID Ovary Placenta Testis
ENSMUST00000120457 1.358±0.00 0.693±0.42 0.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GX CIL_0001GX_0002 CGP 8:111940703-111992302
CIL_0002D7 CIL_0002D7_0002 CGP 8:111966908-112011323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0006396 IEA RNA processing
GO:0008251 ISS tRNA-specific adenosine deaminase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307921 ADAT1-001 protein_coding Homo_sapiens 0 817
ENST00000564657 ADAT1-006 protein_coding Homo_sapiens 0 361
ENST00000565109 ADAT1-007 processed_transcript Homo_sapiens 0 250
ENST00000566445 ADAT1-002 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000567281 ADAT1-008 protein_coding Homo_sapiens 0 536
ENST00000568001 ADAT1-009 nonsense_mediated_decay Homo_sapiens 0 250

Loading