C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adenosine deaminase, tRNA-specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031949 Adat1 10090 - 8:111966908-111992302 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034427 Adat1-001 111966908-111992302 protein_coding
  ENSMUST00000120457 Adat1-002 111971553-111990412 protein_coding
  ENSMUST00000139820 Adat1-003 111970865-111992302 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034427ENSMUST00000120457ENSMUST00000139820
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034427 1.251±0.47 0.891±0.27 0.825±0.05 1.250±0.58 0.659±0.26 0.563±0.35 0.581±0.19 1.014±0.12 1.376±0.43 0.622±0.17 0.658±0.21 1.668±0.43 1.339±0.80 0.870±0.47
ENSMUST00000120457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.358±0.00 0.693±0.42 0.685±0.00
ENSMUST00000139820 0.557±0.16 0.545±0.00 1.599±0.38 1.100±0.14 0.781±0.43 0.622±0.32 0.149±0.03 0.471±0.11 0.955±0.40 0.698±0.14 0.464±0.09 1.207±0.32 0.675±0.28 1.331±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GX CIL_0001GX_0002 CGP 8:111940703-111992302
CIL_0002D7 CIL_0002D7_0002 CGP 8:111966908-112011323

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005575 ND cellular_component
GO:0006396 IEA RNA processing
GO:0008033 ISS tRNA processing
GO:0008251 ISS tRNA-specific adenosine deaminase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061348 adat1 adenosine deaminase, tRNA-specific 1 protein_coding Danio_rerio
ENSG00000065457 ADAT1 adenosine deaminase, tRNA-specific 1 protein_coding Homo_sapiens

Loading