C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002D7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065457-ENSG00000065427 CGP 9606 16:75596981-75648643
GeneTranscriptPositionBiotype
ENSG00000065427 (KARS)
lysyl-tRNA synthetase 		ENST00000302445 (KARS-001) 75627724-75647679 protein_coding
ENST00000319410 (KARS-002) 75627474-75647665 protein_coding
ENST00000562875 (KARS-006) 75631722-75647651 nonsense_mediated_decay
ENST00000564578 (KARS-004) 75627770-75647648 nonsense_mediated_decay
ENST00000565738 (KARS-010) 75639782-75641602 retained_intron
ENST00000566249 (KARS-008) 75634241-75647607 nonsense_mediated_decay
ENST00000566560 (KARS-003) 75633971-75648643 retained_intron
ENST00000566772 (KARS-011) 75635324-75636073 protein_coding
ENST00000568378 (KARS-009) 75627758-75647624 protein_coding
ENST00000568682 (KARS-007) 75635699-75647650 protein_coding
ENST00000569298 (KARS-013) 75627846-75629009 retained_intron
ENST00000570215 (KARS-012) 75635791-75647655 protein_coding
ENSG00000065457 (ADAT1)
adenosine deaminase, tRNA-specific 1 		ENST00000307921 (ADAT1-001) 75600002-75623300 protein_coding
ENST00000562374 (ADAT1-005) 75620769-75623259 protein_coding
ENST00000564657 (ADAT1-006) 75617237-75622783 protein_coding
ENST00000565109 (ADAT1-007) 75617225-75623275 processed_transcript
ENST00000566445 (ADAT1-002) 75599100-75622466 nonsense_mediated_decay
ENST00000566450 (ADAT1-010) 75598133-75608957 protein_coding
ENST00000567281 (ADAT1-008) 75612804-75623281 protein_coding
ENST00000568001 (ADAT1-009) 75612788-75623281 nonsense_mediated_decay
ENST00000568478 (ADAT1-004) 75599877-75602003 processed_transcript
ENST00000568510 (ADAT1-011) 75596981-75603134 protein_coding
ENSG00000166848 (TERF2IP)
telomeric repeat binding factor 2, interacting protein 		ENST00000300086 (TERF2IP-001) 75647786-75657432 protein_coding
ENST00000564671 (TERF2IP-003) 75656207-75761872 protein_coding
ENST00000569234 (TERF2IP-002) 75648396-75656433 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_0002D7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031949-ENSMUSG00000031948 CGP 10090 8:111966908-112011323
GeneTranscriptPositionBiotype
ENSMUSG00000031948 (Kars)
lysyl-tRNA synthetase 		ENSMUST00000034426 (Kars-201) 111993444-112011323 protein_coding
ENSMUST00000093120 (Kars-202) 111993440-112011288 protein_coding
ENSMUST00000164470 (Kars-203) 111993444-112011266 protein_coding
ENSMUSG00000031949 (Adat1)
adenosine deaminase, tRNA-specific 1 		ENSMUST00000034427 (Adat1-001) 111966908-111992302 protein_coding
ENSMUST00000120457 (Adat1-002) 111971553-111990412 protein_coding
ENSMUST00000139820 (Adat1-003) 111970865-111992302 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D7_0001ENSG00000065427ENST00000302445ENST00000319410ENST00000562875ENST00000564578ENST00000565738ENST00000566249ENST00000566560ENST00000566772ENST00000568378ENST00000568682ENST00000569298ENST00000570215ENSG00000065457ENST00000307921ENST00000562374ENST00000564657ENST00000565109ENST00000566445ENST00000566450ENST00000567281ENST00000568001ENST00000568478ENST00000568510ENSG00000166848ENST00000300086ENST00000564671ENST00000569234CIL_0002D7_0002ENSMUSG00000031948ENSMUST00000034426ENSMUST00000093120ENSMUST00000164470ENSMUSG00000031949ENSMUST00000034427ENSMUST00000120457ENSMUST00000139820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D7_0001ENSG00000065427ENST00000302445ENST00000319410ENST00000564578ENSG00000065457ENST00000307921ENST00000564657ENST00000566445ENST00000568001ENSG00000166848ENST00000300086CIL_0002D7_0002ENSMUSG00000031948ENSMUST00000034426ENSMUST00000093120ENSMUST00000164470ENSMUSG00000031949ENSMUST00000034427ENSMUST00000120457ENSMUST00000139820
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065427 ENST00000302445 51.270±0.00 58.730±0.00 5.968±0.00 19.819±8.54 27.903±12.36 38.049±21.28 23.589±14.95 24.395±15.33 19.192±5.89 27.380±16.11 75.719±59.18 30.418±20.26 40.819±14.90 61.579±26.55
ENST00000319410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.561±0.00 N/A N/A
ENST00000562875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.991±0.00 8.981±0.00 17.566±0.00
ENST00000565738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000065457 ENST00000307921 N/A N/A N/A N/A 1.790±0.00 N/A N/A 0.966±0.00 1.547±0.00 N/A N/A 1.276±0.00 N/A 9.291±5.37
ENST00000562374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564657 N/A N/A N/A N/A N/A 5.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566445 N/A 2.005±0.00 N/A 1.939±0.11 N/A 1.136±0.25 0.891±0.73 1.249±0.00 N/A 1.670±0.00 N/A 1.982±0.65 N/A 3.780±0.00
ENST00000566450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568001 N/A N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000568478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166848 ENST00000300086 36.118±0.00 36.238±0.00 3.761±0.00 79.521±43.68 18.889±10.90 44.330±0.00 13.743±9.65 18.771±13.88 11.416±2.76 26.023±18.39 11.785±8.40 24.315±17.29 18.977±1.87 48.587±9.34
ENST00000564671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031948 ENSMUST00000034426 18.961±0.95 10.454±1.08 24.606±1.92 23.275±9.55 17.113±3.81 23.552±3.97 17.532±0.93 20.951±1.73 25.678±13.67 17.365±1.74 23.885±1.63 33.587±6.05 37.693±24.41 28.188±6.00
ENSMUST00000093120 14.049±6.26 4.598±1.15 6.430±1.07 10.736±1.15 5.449±1.04 6.455±1.17 5.664±1.22 5.452±1.08 5.704±1.73 3.018±0.37 10.735±1.99 7.494±3.68 11.274±9.95 3.396±0.45
ENSMUST00000164470 N/A 3.267±0.29 N/A N/A 4.214±0.00 4.484±0.00 N/A N/A N/A 2.210±0.00 3.635±0.00 N/A N/A N/A
ENSMUSG00000031949 ENSMUST00000034427 1.251±0.47 0.891±0.27 0.825±0.05 1.250±0.58 0.659±0.26 0.563±0.35 0.581±0.19 1.014±0.12 1.376±0.43 0.622±0.17 0.658±0.21 1.668±0.43 1.339±0.80 0.870±0.47
ENSMUST00000120457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.358±0.00 0.693±0.42 0.685±0.00
ENSMUST00000139820 0.557±0.16 0.545±0.00 1.599±0.38 1.100±0.14 0.781±0.43 0.622±0.32 0.149±0.03 0.471±0.11 0.955±0.40 0.698±0.14 0.464±0.09 1.207±0.32 0.675±0.28 1.331±0.24

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