C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13350
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120519 Gm13350-001 ENSMUSG00000083070 10090 - 2:18249365-18249843 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaENSMUST00000120519
Transcript ID Bladder Brain Heart Liver Ovary Placenta
ENSMUST00000120519 0.059±0.03 0.067±0.00 0.143±0.00 0.030±0.02 0.068±0.00 0.050±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0002 VISTA 2:17746233-18347055
CIL_0007JW CIL_0007JW_0002 UCNEbase 2:18048722-18311061
CIL_000238 CIL_000238_0002 CGP 2:18055237-18392830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226796 GAR1-003 protein_coding Homo_sapiens 0 448
ENST00000394631 GAR1-001 protein_coding Homo_sapiens 0 448
ENST00000506840 GAR1-006 retained_intron Homo_sapiens 0 433
ENST00000513481 RP11-326I11.1-001 processed_pseudogene Homo_sapiens 0 350

Loading