C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5730416F02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120648 5730416F02Rik-001 ENSMUSG00000081793 10090 + X:109001485-109002296 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000120648
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000120648 0.056±0.00 0.012±0.00 0.061±0.00 0.095±0.03 0.209±0.06 0.155±0.07 0.059±0.02 0.015±0.00 0.055±0.00 0.087±0.01 0.299±0.11 0.093±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KC CIL_0003KC_0002 CGP X:108737016-109013404

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263867 CAPG-001 protein_coding Homo_sapiens 0 671
ENST00000409275 CAPG-012 protein_coding Homo_sapiens 0 542
ENST00000409670 CAPG-003 protein_coding Homo_sapiens 0 671
ENST00000409724 CAPG-002 protein_coding Homo_sapiens 0 671
ENST00000409921 CAPG-004 protein_coding Homo_sapiens 0 514
ENST00000415012 CAPG-009 processed_transcript Homo_sapiens 0 204
ENST00000439385 CAPG-005 protein_coding Homo_sapiens 0 610
ENST00000447219 CAPG-008 protein_coding Homo_sapiens 0 610
ENST00000449030 CAPG-011 protein_coding Homo_sapiens 0 610
ENST00000459793 CAPG-007 retained_intron Homo_sapiens 0 597
ENST00000483659 CAPG-014 processed_transcript Homo_sapiens 0 527

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