C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121382 Atp5l-ps2-001 ENSMUSG00000080823 10090 + 11:86185329-86185642 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000121382
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000121382 0.616±0.38 0.433±0.08 0.338±0.13 0.619±0.00 0.901±0.34 0.215±0.01 0.357±0.18 0.572±0.51 0.469±0.14 0.509±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0002 UCNEbase 11:85613059-86270571
CIL_00096P CIL_00096P_0002 VISTA 11:85867092-86468104
CIL_0000LR CIL_0000LR_0002 CGP 11:85886422-86201193
CIL_0006ZY CIL_0006ZY_0002 CGP 11:86058138-86257575

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300688 ATP5L-001 protein_coding Homo_sapiens 0 302
ENST00000434169 ATP5LP4-001 processed_pseudogene Homo_sapiens 1.96182e-44 182
ENST00000440646 ATP5LP2-001 processed_pseudogene Homo_sapiens 0 303
ENST00000527186 ATP5L-007 retained_intron Homo_sapiens 0 296
ENST00000529460 ATP5L-002 processed_transcript Homo_sapiens 0 294
ENST00000529770 ATP5L-003 processed_transcript Homo_sapiens 0 296
ENST00000529790 ATP5L-008 retained_intron Homo_sapiens 0 296
ENST00000533172 ATP5L-004 processed_transcript Homo_sapiens 4e-32 141
ENST00000560431 RP11-30K9.7-001 processed_pseudogene Homo_sapiens 0 187

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