C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121584 Prdm15-001 ENSMUSG00000014039 10090 - 16:97791520-97851850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121584 1.635±1.07 1.202±0.43 0.959±0.58 6.067±2.55 1.486±0.75 2.069±0.77 0.736±0.08 0.853±0.63 0.906±0.40 1.390±0.58 0.586±0.31 2.628±0.73 1.416±1.00 0.547±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VK CIL_0001VK_0002 CGP 16:97741933-97851850
CIL_0001D3 CIL_0001D3_0003 CGP 16:97791467-97922633

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269844 PRDM15-201 protein_coding Homo_sapiens 0 3291
ENST00000398548 PRDM15-018 protein_coding Homo_sapiens 0 3565
ENST00000422911 PRDM15-010 protein_coding Homo_sapiens 0 2394
ENST00000433067 PRDM15-001 nonsense_mediated_decay Homo_sapiens 0 3291
ENST00000441787 PRDM15-015 nonsense_mediated_decay Homo_sapiens 0 2300
ENST00000447016 PRDM15-002 nonsense_mediated_decay Homo_sapiens 0 3448
ENST00000447207 PRDM15-202 protein_coding Homo_sapiens 0 3452
ENST00000449395 PRDM15-016 nonsense_mediated_decay Homo_sapiens 0 3389
ENST00000465955 PRDM15-014 processed_transcript Homo_sapiens 0 292
ENST00000470586 PRDM15-004 processed_transcript Homo_sapiens 0 891
ENST00000486812 PRDM15-003 retained_intron Homo_sapiens 0 891
ENST00000489661 PRDM15-009 retained_intron Homo_sapiens 0 562
ENST00000491486 PRDM15-011 processed_transcript Homo_sapiens 0 424
ENST00000495217 PRDM15-012 processed_transcript Homo_sapiens 0 767

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