C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PR domain containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000014039 Prdm15 10090 - 16:97791467-97851850 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095849 Prdm15-201 97791467-97851227 protein_coding
  ENSMUST00000119200 Prdm15-008 97835784-97848884 protein_coding
  ENSMUST00000121584 Prdm15-001 97791520-97851850 protein_coding
  ENSMUST00000126916 Prdm15-007 97795723-97797919 retained_intron
  ENSMUST00000128917 Prdm15-003 97818794-97829728 retained_intron
  ENSMUST00000129331 Prdm15-005 97835366-97839967 retained_intron
  ENSMUST00000131951 Prdm15-004 97792332-97800302 retained_intron
  ENSMUST00000135505 Prdm15-009 97837681-97851227 protein_coding
  ENSMUST00000136529 Prdm15-006 97794518-97803445 processed_transcript
  ENSMUST00000142295 Prdm15-002 97791877-97851783 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095849ENSMUST00000121584ENSMUST00000131951ENSMUST00000136529ENSMUST00000142295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095849 N/A N/A N/A 0.794±0.21 N/A 0.813±0.00 N/A N/A N/A N/A 0.323±0.07 1.008±0.19 N/A 0.285±0.00
ENSMUST00000121584 1.635±1.07 1.202±0.43 0.959±0.58 6.067±2.55 1.486±0.75 2.069±0.77 0.736±0.08 0.853±0.63 0.906±0.40 1.390±0.58 0.586±0.31 2.628±0.73 1.416±1.00 0.547±0.13
ENSMUST00000131951 1.007±0.35 1.672±0.62 N/A 1.144±0.00 1.758±0.18 1.636±0.24 0.387±0.00 0.697±0.06 0.653±0.23 0.873±0.04 N/A 2.478±0.60 0.492±0.19 N/A
ENSMUST00000136529 N/A 2.274±0.00 N/A N/A 5.879±0.00 6.490±0.99 2.915±0.00 N/A 2.229±0.00 3.315±0.00 N/A 9.026±1.36 N/A N/A
ENSMUST00000142295 0.972±0.16 N/A 0.418±0.00 1.147±0.21 N/A N/A 0.251±0.00 N/A 0.393±0.06 0.576±0.00 0.191±0.04 1.466±0.53 0.788±0.16 0.399±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VK CIL_0001VK_0002 CGP 16:97741933-97851850
CIL_0001D3 CIL_0001D3_0003 CGP 16:97791467-97922633

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087972 prdm15 PR domain containing 15 protein_coding Danio_rerio
ENSDARG00000091516 prdm15 PR domain containing 15 protein_coding Danio_rerio
ENSG00000141956 PRDM15 PR domain containing 15 protein_coding Homo_sapiens

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