C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13440
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121665 Gm13440-001 ENSMUSG00000081591 10090 + 2:36909095-36909590 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000121665
Transcript ID Testis
ENSMUST00000121665 0.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RG CIL_0003RG_0002 CGP 2:36906948-36928112

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 516
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 516
ENST00000418784 BTF3P9-001 processed_pseudogene Homo_sapiens 0 285
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 460
ENST00000448054 BTF3P6-001 processed_pseudogene Homo_sapiens 0 279
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 424
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 0 311
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 470
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 6e-38 161
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 363
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 473
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 322

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