C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418852 BTF3P4-001 ENSG00000224820 9606 - 9:72107818-72108312 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000418852
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000418852 0.085±0.00 0.214±0.00 0.031±0.00 0.031±0.00 0.284±0.00 0.084±0.00 0.030±0.00 0.189±0.00 0.094±0.00 0.078±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QU CIL_0007QU_0001 VISTA 9:72062282-72663099

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 649
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 649
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 649
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000122107 Gm7973-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000139070 Gm7613-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000058881 Gm5341-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 505
ENSMUST00000121665 Gm13440-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000117560 Gm7834-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000191444 RP23-130K20.4-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000119073 Gm9308-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000189001 RP23-247F18.2-001 processed_pseudogene Mus_musculus 0 246

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