C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519706 RP11-382J24.2-001 ENSG00000254272 9606 + 8:22492631-22493044 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000519706
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000519706 0.230±0.00 0.099±0.00 0.700±0.57 0.668±0.58 0.089±0.03 0.487±0.00 1.478±0.00 0.145±0.00 0.241±0.21 0.058±0.00 0.157±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 457
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 457
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 457
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000139070 Gm7613-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000122107 Gm7973-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 390
ENSMUST00000058881 Gm5341-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000121665 Gm13440-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000191444 RP23-130K20.4-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000119073 Gm9308-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000189001 RP23-247F18.2-001 processed_pseudogene Mus_musculus 7.00005e-41 171

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