C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 9225
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121921 Gm9225-001 ENSMUSG00000083641 10090 + X:110539337-110540480 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartTestisENSMUST00000121921
Transcript ID Brain Heart Testis
ENSMUST00000121921 0.039±0.00 0.039±0.00 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L1 CIL_0007L1_0003 UCNEbase X:109845197-110817960
CIL_0008C6 CIL_0008C6_0002 VISTA X:110018086-110619120
CIL_0008TX CIL_0008TX_0002 VISTA X:110077387-110678071
CIL_00087R CIL_00087R_0002 VISTA X:110516983-111118738

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 224
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 224
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 224
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 224
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 224
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0.000000000000002 88
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 2e-29 134
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 196
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0.0000000006 69
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 224
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 224
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 3e-38 163
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 3e-38 163
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 8e-24 115
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0.00000000000008 82
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 224

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