C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 70
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515281 GAPDHP70-001 ENSG00000249489 9606 - 11:88408179-88409223 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000515281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000515281 0.062±0.00 0.033±0.00 0.436±0.00 0.125±0.00 0.138±0.00 0.032±0.00 0.100±0.00 0.017±0.00 0.014±0.00 0.242±0.23 0.772±0.00 0.039±0.00 0.055±0.00 0.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JJ CIL_0001JJ_0002 CGP 11:88293592-89065945

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 850
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 649
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000122207 Gm12864-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000121385 Gm12464-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 579
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000121923 Gm4908-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000120570 4930448K20Rik-001 transcribed_processed_pseudogene Mus_musculus 0 536
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 527
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000182374 Gm7719-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000182082 Gm8957-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000182057 Gm5350-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 462
ENSMUST00000118175 Gm11929-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000182470 Gm26925-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000182273 Gm26931-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000182376 Gm26959-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 1.00053e-42 178
ENSMUST00000182674 Gm26928-001 processed_pseudogene Mus_musculus 6e-40 169
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 2e-35 154
ENSMUST00000121921 Gm9225-001 processed_pseudogene Mus_musculus 8e-24 115
ENSMUST00000183221 Gm9192-001 processed_pseudogene Mus_musculus 0.000000000004 77
ENSMUST00000183320 Gm8167-001 processed_pseudogene Mus_musculus 0.0000001 62
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 0.0000004 60
ENSMUST00000118477 Gm13501-001 processed_pseudogene Mus_musculus 0.00007 53

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