C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4887
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122230 Gm4887-001 ENSMUSG00000086229 10090 + 7:104821204-104822256 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000122230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000122230 0.169±0.07 0.157±0.00 0.210±0.17 0.192±0.01 0.150±0.03 0.121±0.01 0.076±0.00 0.073±0.04 0.184±0.11 0.128±0.08 0.287±0.22 0.026±0.00 0.739±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XF CIL_0001XF_000N CGP 7:104768160-104842603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000395510 TWF1-001 protein_coding Homo_sapiens 0 1264
ENST00000426370 RP13-228J13.6-001 processed_pseudogene Homo_sapiens 0 935
ENST00000546506 TWF1-006 protein_coding Homo_sapiens 0 381
ENST00000546662 TWF1-007 protein_coding Homo_sapiens 0 904
ENST00000547459 TWF1-004 nonsense_mediated_decay Homo_sapiens 0 1229
ENST00000547564 TWF1-010 processed_transcript Homo_sapiens 0 215
ENST00000548315 TWF1-005 protein_coding Homo_sapiens 0 1177
ENST00000548403 TWF1-012 protein_coding Homo_sapiens 0 392
ENST00000550371 TWF1-008 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000551789 TWF1-009 retained_intron Homo_sapiens 0 669
ENST00000552521 TWF1-003 protein_coding Homo_sapiens 0 1229
ENST00000580812 TWF1P1-001 processed_pseudogene Homo_sapiens 0 1254

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