C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: twinfilin actin-binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552521 TWF1-003 ENSG00000151239 9606 - 12:43793723-43806287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungMuscleOvaryPlacentaENST00000552521
Transcript ID Adipose Bladder Breast Kidney Liver Lung Muscle Ovary Placenta
ENST00000552521 3.518±0.00 3.090±0.00 7.766±0.00 3.269±0.00 4.410±0.00 2.084±0.00 0.764±0.00 3.438±0.00 0.945±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R5 CIL_0006R5_0001 CGP 12:43758944-43806375
CIL_0006R8 CIL_0006R8_0001 CGP 12:43793723-44389762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005622 IEA intracellular

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023087 Twf1-001 protein_coding Mus_musculus 0 1539
ENSMUST00000122230 Gm4887-001 processed_pseudogene Mus_musculus 0 1229
ENSMUST00000155654 Twf1-003 processed_transcript Mus_musculus 0 641
ENSMUST00000152590 Twf1-002 protein_coding Mus_musculus 0 409
ENSMUST00000127347 Twf1-004 retained_intron Mus_musculus 0 289
ENSMUST00000109248 Irak4-002 protein_coding Mus_musculus 0 220

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