| Transcript ID | Breast | Colon | Ovary |
|---|---|---|---|
| ENSMUST00000122288 | 3.429±0.00 | 3.167±0.12 | 6.823±3.18 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SEC22 vesicle trafficking protein homolog B (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000122288  |
Sec22b-003 |
ENSMUSG00000027879 |
10090 | + |
3:97901227-97915211  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000139 | IDA | Golgi membrane |
| GO:0005789 | IDA | endoplasmic reticulum membrane |
| GO:0006888 | TAS | ER to Golgi vesicle-mediated transport |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016192 | IDA | vesicle-mediated transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000128991
|
sec22bb-201 | protein_coding | Danio_rerio | 0 | 331 |
|
ENSDART00000136856
|
sec22bb-001 | protein_coding | Danio_rerio | 0 | 331 |
|
ENSDART00000139837
|
sec22bb-002 | protein_coding | Danio_rerio | 2e-25 | 121 |
|
ENST00000578049
|
SEC22B-001 | protein_coding | Homo_sapiens | 0 | 736 |
|
ENST00000616023
|
CH17-478G19.2-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 606 |
|
ENST00000618406
|
CH17-385C13.2-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 409 |
|
ENST00000618538
|
SEC22B-002 | protein_coding | Homo_sapiens | 4.00001e-40 | 171 |
|
ENST00000618702
|
SEC22B-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 601 |
