C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SEC22 vesicle trafficking protein homolog B (S. cerevisiae), b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136856 sec22bb-001 ENSDARG00000093866 7955 + 8:19940473-19948985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000136856
Transcript ID Brain Heart Kidney Muscle
ENSDART00000136856 19.761±4.21 7.028±1.20 6.284±0.86 6.624±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016021 IEA integral to membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029476 Sec22b-001 protein_coding Mus_musculus 0 422
ENSMUST00000122288 Sec22b-003 protein_coding Mus_musculus 0 331
ENSMUST00000130778 Sec22b-002 nonsense_mediated_decay Mus_musculus 0 412
ENST00000578049 SEC22B-001 protein_coding Homo_sapiens 0 372
ENST00000618538 SEC22B-002 protein_coding Homo_sapiens 0.0000000004 71

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