C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15975
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122385 Gm15975-001 ENSMUSG00000083902 10090 + 5:55624188-55625593 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122385 0.314±0.13 0.179±0.09 0.101±0.02 0.290±0.05 0.515±0.13 0.269±0.21 0.326±0.28 0.132±0.04 0.404±0.22 0.747±0.07 0.042±0.01 0.342±0.12 1.032±0.75 0.175±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079S CIL_00079S_0002 CGP 5:53998417-58129351

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296783 PAPD4-001 protein_coding Homo_sapiens 0 1513
ENST00000423041 PAPD4-007 protein_coding Homo_sapiens 0 1568
ENST00000428308 PAPD4-201 protein_coding Homo_sapiens 0 1513
ENST00000453514 PAPD4-202 protein_coding Homo_sapiens 0 1513
ENST00000504233 PAPD4-002 protein_coding Homo_sapiens 0 734
ENST00000504982 PAPD4-015 processed_transcript Homo_sapiens 0 206
ENST00000505571 PAPD4-006 retained_intron Homo_sapiens 0 250
ENST00000505770 PAPD4-005 retained_intron Homo_sapiens 0 204
ENST00000509227 PAPD4-003 retained_intron Homo_sapiens 4e-35 152
ENST00000510721 PAPD4-004 retained_intron Homo_sapiens 0 466
ENST00000513735 PAPD4-016 processed_transcript Homo_sapiens 0 579
ENST00000515298 PAPD4-012 retained_intron Homo_sapiens 0 540

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