C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122442 Gm15335-001 ENSMUSG00000083766 10090 - 18:38717528-38718128 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLungOvaryENSMUST00000122442
Transcript ID Adipose Lung Ovary
ENSMUST00000122442 0.138±0.00 0.205±0.00 0.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253788 RPL27-001 protein_coding Homo_sapiens 0 359
ENST00000411843 AC096664.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000426330 RP11-419N10.5-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000441321 AC016691.2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000468034 RP11-829H16.2-001 processed_pseudogene Homo_sapiens 0 298
ENST00000513087 CTD-2108O9.4-001 processed_pseudogene Homo_sapiens 1e-26 122
ENST00000589037 RPL27-004 protein_coding Homo_sapiens 0 359
ENST00000589913 RPL27-003 protein_coding Homo_sapiens 0 359

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