C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411843 AC096664.1-001 ENSG00000234488 9606 + 2:63684305-63684710 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverMuscleOvaryTestisENST00000411843
Transcript ID Adipose Adrenal Breast Colon Heart Liver Muscle Ovary Testis
ENST00000411843 0.038±0.00 0.080±0.00 0.040±0.00 0.037±0.00 0.096±0.00 0.143±0.00 0.388±0.00 0.106±0.00 0.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000100 CIL_000100_0002 CGP 2:63050057-63827843
CIL_000105 CIL_000105_0002 CGP 2:63588609-63891562

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118048 Gm11518-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000107249 Rpl27-002 protein_coding Mus_musculus 0 446
ENSMUST00000077856 Rpl27-001 protein_coding Mus_musculus 0 446
ENSMUST00000097682 Rpl27-ps3-201 protein_coding Mus_musculus 0 446
ENSMUST00000119683 Gm6341-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000088784 Rpl27-ps1-201 processed_pseudogene Mus_musculus 0 418
ENSMUST00000117470 Gm15779-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000121828 Gm15730-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000120378 Rpl27-ps2-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000079690 Gm4825-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000122442 Gm15335-001 processed_pseudogene Mus_musculus 0 272

Loading