C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468034 RP11-829H16.2-001 ENSG00000213867 9606 + 14:30821419-30821843 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalHeartLungTestisENST00000468034
Transcript ID Adipose Adrenal Heart Lung Testis
ENST00000468034 0.034±0.00 0.106±0.00 0.031±0.00 0.556±0.52 0.106±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000893 CIL_000893_0001 VISTA 14:30219860-30821737
CIL_0007KV CIL_0007KV_0002 UCNEbase 14:30606668-30894124
CIL_0003T0 CIL_0003T0_0001 CGP 14:30622112-30895065

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077856 Rpl27-001 protein_coding Mus_musculus 0 424
ENSMUST00000097682 Rpl27-ps3-201 protein_coding Mus_musculus 0 424
ENSMUST00000118048 Gm11518-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000107249 Rpl27-002 protein_coding Mus_musculus 0 420
ENSMUST00000088784 Rpl27-ps1-201 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119683 Gm6341-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000120378 Rpl27-ps2-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000117470 Gm15779-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000121828 Gm15730-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000139939 Rpl27-003 processed_transcript Mus_musculus 0 315
ENSMUST00000122442 Gm15335-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000172081 Gm8398-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000067495 Wnt11-001 protein_coding Mus_musculus 0 200
ENSMUST00000119873 Gm14614-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000122089 Gm14775-001 processed_pseudogene Mus_musculus 3e-30 135

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