C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 1947
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122451 Gm1947-001 ENSMUSG00000083841 10090 + X:157429417-157430326 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaENSMUST00000122451
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000122451 0.050±0.00 0.230±0.07 0.009±0.00 0.076±0.00 0.211±0.00 0.053±0.00 0.011±0.00 0.123±0.00 0.026±0.00 0.045±0.00 0.038±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000415272 NOP56-010 protein_coding Homo_sapiens 0 566
ENST00000447491 NOP56P2-001 processed_pseudogene Homo_sapiens 0 246
ENST00000466447 NOP56-006 processed_transcript Homo_sapiens 0 542
ENST00000467196 NOP56-007 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000612233 NOP56-019 retained_intron Homo_sapiens 4e-31 141
ENST00000616692 NOP56-020 retained_intron Homo_sapiens 4e-31 141

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