| Transcript ID | Lung |
|---|---|
| ENST00000467196 | 8.915±0.00 |
Genome
Exciting message
Genes
Connecting
Transcripts
Connecting
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | NOP56 ribonucleoprotein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000467196  |
NOP56-007 |
ENSG00000101361 |
9606 | + |
20:2655436-2658393  |
nonsense_mediated_decay |
|
Genome Exciting message Genes Connecting Transcripts Connecting Powered by Dalliance 0.11.11 |
||||||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SG | CIL_0007SG_0001 | VISTA | 20:2438562-3039143 |
| CIL_0000FW | CIL_0000FW_0001 | CGP | 20:2536607-2658393 |
| CIL_0000FV | CIL_0000FV_0001 | CGP | 20:2652145-2664219 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000146454
|
Nop56-014 | protein_coding | Mus_musculus | 0 | 1022 |
|
ENSMUST00000103198
|
Nop56-001 | protein_coding | Mus_musculus | 0 | 998 |
|
ENSMUST00000162063
|
Nop56-011 | retained_intron | Mus_musculus | 0 | 754 |
|
ENSMUST00000150401
|
Nop56-013 | nonsense_mediated_decay | Mus_musculus | 0 | 693 |
|
ENSMUST00000122451
|
Gm1947-001 | processed_pseudogene | Mus_musculus | 0 | 542 |
|
ENSMUST00000028890
|
Nop56-005 | protein_coding | Mus_musculus | 0 | 540 |
|
ENSMUST00000153353
|
Nop56-004 | retained_intron | Mus_musculus | 0 | 540 |
|
ENSMUST00000133351
|
Nop56-016 | retained_intron | Mus_musculus | 0 | 538 |
|
ENSMUST00000149955
|
Nop56-010 | nonsense_mediated_decay | Mus_musculus | 0 | 536 |
|
ENSMUST00000184633
|
Gm27219-001 | processed_pseudogene | Mus_musculus | 0 | 523 |
|
ENSMUST00000117810
|
Gm9432-001 | processed_pseudogene | Mus_musculus | 0 | 512 |
|
ENSMUST00000159373
|
Nop56-018 | protein_coding | Mus_musculus | 0 | 475 |
|
ENSMUST00000161025
|
Nop56-019 | retained_intron | Mus_musculus | 0 | 398 |
|
ENSMUST00000145335
|
Nop56-017 | retained_intron | Mus_musculus | 0 | 307 |
|
ENSMUST00000160976
|
Nop56-009 | retained_intron | Mus_musculus | 0 | 305 |
|
ENSMUST00000161543
|
Nop56-003 | retained_intron | Mus_musculus | 0 | 305 |
|
ENSMUST00000150745
|
Nop56-002 | retained_intron | Mus_musculus | 0 | 243 |
|
ENSMUST00000143547
|
Nop56-012 | nonsense_mediated_decay | Mus_musculus | 1e-37 | 161 |
