C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122885 Tcirg1-008 ENSMUSG00000001750 10090 - 19:3896270-3902023 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000122885
Transcript ID Adrenal Brain Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000122885 23.688±1.66 1.102±0.00 7.851±0.00 12.771±0.00 1.394±0.30 11.766±5.78 3.360±0.17 1.247±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 0 771
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 0 771
ENST00000530449 TCIRG1-006 retained_intron Homo_sapiens 0 196
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 0 771
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 0 771

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