C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123116 Tspan12-004 ENSMUSG00000029669 10090 - 6:21795578-21851981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartOvaryPlacentaTestisENSMUST00000123116
Transcript ID Brain Breast Heart Ovary Placenta Testis
ENSMUST00000123116 10.351±0.00 13.920±0.00 5.170±0.00 12.280±0.00 2.061±0.00 1.053±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U7 CIL_0005U7_0003 CGP 6:21215503-21852515
CIL_0007SO CIL_0007SO_0002 VISTA 6:21578055-22180750
CIL_0004XL CIL_0004XL_0003 CGP 6:21771395-21976038

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222747 TSPAN12-001 protein_coding Homo_sapiens 0 819
ENST00000415871 TSPAN12-002 protein_coding Homo_sapiens 0 819
ENST00000424710 TSPAN12-006 protein_coding Homo_sapiens 0 490
ENST00000430985 TSPAN12-004 protein_coding Homo_sapiens 0 442
ENST00000433758 TSPAN12-005 protein_coding Homo_sapiens 0 508
ENST00000441017 TSPAN12-007 protein_coding Homo_sapiens 0 601
ENST00000450414 TSPAN12-003 nonsense_mediated_decay Homo_sapiens 0 311

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