C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) type B homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123256 Mmab-004 ENSMUSG00000029575 10090 - 5:114434767-114443992 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryPlacentaTestisENSMUST00000123256
Transcript ID Colon Lung Ovary Placenta Testis
ENSMUST00000123256 2.853±0.00 2.616±0.00 3.972±0.30 1.623±0.38 0.667±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000401 CIL_000401_0002 CGP 5:114380628-114444059
CIL_0001GN CIL_0001GN_0003 CGP 5:114431034-114460591

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000420167 MMAB-007 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000503497 MMAB-008 nonsense_mediated_decay Homo_sapiens 0.00000000000001 84
ENST00000537496 MMAB-004 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000540016 MMAB-003 protein_coding Homo_sapiens 0 385
ENST00000541763 MMAB-005 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000542390 MMAB-010 retained_intron Homo_sapiens 0 420
ENST00000544051 MMAB-002 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000545712 MMAB-001 protein_coding Homo_sapiens 0 665

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