C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) cblB type
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000537496 MMAB-004 ENSG00000139428 9606 - 12:109556703-109573503 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000537496
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000537496 6.777±0.00 6.698±0.00 4.975±3.83 12.663±0.00 4.832±0.00 11.733±0.00 13.869±0.00 26.976±0.00 4.260±3.44 5.878±0.00 8.458±5.42 7.867±4.00 9.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000401 CIL_000401_0001 CGP 12:109477402-109573874
CIL_0001GN CIL_0001GN_0002 CGP 12:109553737-109598117

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123256 Mmab-004 retained_intron Mus_musculus 0 508
ENSMUST00000031560 Mmab-001 protein_coding Mus_musculus 0 508
ENSMUST00000150519 Mmab-002 processed_transcript Mus_musculus 0 254
ENSMUST00000112245 Mmab-003 protein_coding Mus_musculus 0 254

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