C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) cblB type
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540016 MMAB-003 ENSG00000139428 9606 - 12:109556697-109573497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000540016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000540016 12.408±0.00 14.827±0.00 1.971±0.00 9.655±7.49 15.436±13.55 5.437±3.10 5.543±3.59 15.641±2.07 18.289±16.74 6.845±0.00 3.692±1.99 13.959±9.30 6.423±1.09 13.653±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000401 CIL_000401_0001 CGP 12:109477402-109573874
CIL_0001GN CIL_0001GN_0002 CGP 12:109553737-109598117

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150519 Mmab-002 processed_transcript Mus_musculus 0 577
ENSMUST00000031560 Mmab-001 protein_coding Mus_musculus 0 479
ENSMUST00000123256 Mmab-004 retained_intron Mus_musculus 0 385
ENSMUST00000112245 Mmab-003 protein_coding Mus_musculus 0 254

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