C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001GN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068344-ENSDARG00000004130 CGP 7955 5:21272909-21293023
GeneTranscriptPositionBiotype
ENSDARG00000004130 (mvk)
mevalonate kinase
ENSDART00000006673 (mvk-001) 21277526-21293023 protein_coding
ENSDARG00000068344 (mmab)
methylmalonic aciduria (cobalamin deficiency) cblB type
ENSDART00000098795 (mmab-001) 21272909-21277376 protein_coding
ENSDART00000138044 (mmab-002) 21272909-21275843 processed_transcript
CIL_0001GN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139428-ENSG00000110921 CGP 9606 12:109553737-109598117
GeneTranscriptPositionBiotype
ENSG00000110921 (MVK)
mevalonate kinase
ENST00000228510 (MVK-001) 109573812-109597266 protein_coding
ENST00000392727 (MVK-003) 109573837-109597261 protein_coding
ENST00000447878 (MVK-004) 109573793-109597236 nonsense_mediated_decay
ENST00000535044 (MVK-010) 109573341-109586098 processed_transcript
ENST00000537237 (MVK-002) 109573814-109596581 nonsense_mediated_decay
ENST00000539335 (MVK-006) 109573255-109581535 protein_coding
ENST00000539575 (MVK-201) 109574807-109598117 protein_coding
ENST00000539696 (MVK-009) 109573805-109596677 protein_coding
ENST00000540353 (MVK-005) 109587861-109597262 retained_intron
ENST00000545516 (MVK-011) 109581479-109587099 retained_intron
ENST00000545774 (MVK-012) 109573832-109587069 nonsense_mediated_decay
ENST00000546277 (MVK-007) 109573302-109586096 protein_coding
CIL_0001GN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029575-ENSMUSG00000041939 CGP 10090 5:114431034-114460591
GeneTranscriptPositionBiotype
ENSMUSG00000029575 (Mmab)
methylmalonic aciduria (cobalamin deficiency) type B homolog (human)
ENSMUST00000031560 (Mmab-001) 114431034-114444059 protein_coding
ENSMUST00000112245 (Mmab-003) 114433200-114444021 protein_coding
ENSMUST00000123256 (Mmab-004) 114434767-114443992 retained_intron
ENSMUST00000150519 (Mmab-002) 114433278-114443982 processed_transcript
ENSMUSG00000041939 (Mvk)
mevalonate kinase
ENSMUST00000043760 (Mvk-001) 114444280-114460591 protein_coding
ENSMUST00000112239 (Mvk-005) 114444286-114460477 protein_coding
ENSMUST00000124260 (Mvk-004) 114444303-114453096 retained_intron
ENSMUST00000125120 (Mvk-002) 114444294-114460584 retained_intron
ENSMUST00000125650 (Mvk-007) 114444303-114455483 protein_coding
ENSMUST00000137167 (Mvk-003) 114444269-114453149 retained_intron
ENSMUST00000139420 (Mvk-006) 114452420-114460572 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GN_0001ENSDARG00000004130ENSDART00000006673ENSDARG00000068344ENSDART00000098795ENSDART00000138044CIL_0001GN_0002ENSG00000110921ENST00000228510ENST00000392727ENST00000447878ENST00000535044ENST00000537237ENST00000539335ENST00000539575ENST00000539696ENST00000540353ENST00000545516ENST00000545774ENST00000546277CIL_0001GN_0003ENSMUSG00000029575ENSMUST00000031560ENSMUST00000112245ENSMUST00000123256ENSMUST00000150519ENSMUSG00000041939ENSMUST00000043760ENSMUST00000112239ENSMUST00000124260ENSMUST00000125120ENSMUST00000125650ENSMUST00000137167ENSMUST00000139420
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GN_0001ENSDARG00000004130ENSDART00000006673ENSDARG00000068344ENSDART00000098795ENSDART00000138044CIL_0001GN_0002ENSG00000110921ENST00000228510ENST00000392727ENST00000447878ENST00000539335ENST00000540353ENST00000546277CIL_0001GN_0003ENSMUSG00000029575ENSMUST00000031560ENSMUST00000112245ENSMUST00000123256ENSMUST00000150519ENSMUSG00000041939ENSMUST00000043760ENSMUST00000112239ENSMUST00000125120ENSMUST00000125650ENSMUST00000137167
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004130 ENSDART00000006673 N/A N/A N/A 0.930±0.60 N/A N/A 0.729±0.45 2.197±2.40 0.171±0.00 N/A 0.168±0.00 N/A N/A N/A
ENSDARG00000068344 ENSDART00000098795 N/A N/A N/A 7.924±2.84 N/A N/A 4.861±1.60 4.583±3.57 0.587±0.00 N/A 2.472±0.00 N/A N/A N/A
ENSDART00000138044 N/A N/A N/A N/A N/A N/A N/A 9.353±0.05 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110921 ENST00000228510 N/A 4.891±0.00 N/A 0.890±0.00 N/A 1.222±0.00 N/A 11.505±8.10 24.251±0.00 2.768±0.00 1.981±0.00 13.747±3.33 5.862±1.20 31.274±20.86
ENST00000392727 N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447878 3.740±0.00 N/A N/A 11.259±0.00 N/A 2.398±0.00 N/A N/A 0.548±0.00 N/A 2.783±0.00 N/A 4.135±0.00 9.152±0.00
ENST00000535044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539335 N/A N/A N/A N/A N/A N/A N/A N/A 1.675±0.00 N/A N/A N/A N/A N/A
ENST00000539575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540353 N/A N/A 0.203±0.00 N/A 0.328±0.00 N/A N/A N/A N/A 0.499±0.00 N/A N/A N/A N/A
ENST00000545516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546277 N/A N/A N/A N/A N/A N/A 1.231±0.00 7.871±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029575 ENSMUST00000031560 9.301±4.23 11.436±3.42 5.381±0.31 4.489±0.65 7.680±0.61 4.926±1.00 9.060±1.64 7.083±0.65 8.716±2.95 4.047±0.68 13.330±0.56 4.166±0.96 2.901±2.21 0.473±0.24
ENSMUST00000112245 N/A 24.817±3.48 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123256 N/A N/A N/A N/A N/A 2.853±0.00 N/A N/A N/A 2.616±0.00 N/A 3.972±0.30 1.623±0.38 0.667±0.00
ENSMUST00000150519 N/A 9.636±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041939 ENSMUST00000043760 12.365±5.87 12.355±3.69 11.170±3.17 10.803±1.39 9.298±4.60 9.765±4.93 1.881±1.04 4.064±0.78 5.592±2.15 13.147±3.81 1.782±0.56 8.937±4.07 7.888±3.32 2.519±0.49
ENSMUST00000112239 6.890±1.82 12.178±2.14 2.849±0.00 6.857±0.49 4.605±1.52 7.581±1.27 0.704±0.19 3.296±0.63 5.508±2.29 6.019±0.63 0.793±0.32 8.421±2.21 4.053±1.54 1.628±0.22
ENSMUST00000124260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.728±0.00 0.654±0.00 N/A
ENSMUST00000125650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.887±0.30 4.650±0.00 N/A
ENSMUST00000137167 N/A N/A N/A 7.153±0.00 1.717±0.00 N/A N/A N/A N/A N/A N/A 7.295±0.00 N/A N/A
ENSMUST00000139420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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