C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic polyadenylation element binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123727 Cpeb3-006 ENSMUSG00000039652 10090 - 19:37024639-37198109 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonLiverLungOvaryTestisENSMUST00000123727
Transcript ID Adrenal Bladder Colon Liver Lung Ovary Testis
ENSMUST00000123727 2.546±0.00 0.675±0.10 0.704±0.23 0.617±0.24 1.995±0.00 0.875±0.00 14.156±3.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0017148 IMP negative regulation of translation
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115341 protein_coding Danio_rerio 0 309
ENSDART00000084354 cpeb3-001 protein_coding Danio_rerio 0.0000000004 71
ENST00000265997 CPEB3-002 protein_coding Homo_sapiens 0 1496
ENST00000412050 CPEB3-001 protein_coding Homo_sapiens 0 3072
ENST00000614585 CPEB3-201 protein_coding Homo_sapiens 0 1496

Loading