C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synapsin III | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000358763  |
SYN3-001 |
ENSG00000185666 |
9606 | - |
22:32512552-33058372  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002NM | CIL_0002NM_0001 | CGP | 22:32474676-33058372 |
| CIL_0007RH | CIL_0007RH_0001 | VISTA | 22:32494872-33098241 |
| CIL_000337 | CIL_000337_0001 | CGP | 22:32512552-33058372 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003824 | IEA | catalytic activity |
| GO:0005515 | IEA | protein binding |
| GO:0005524 | TAS | ATP binding |
| GO:0007269 | IEA | neurotransmitter secretion |
| GO:0008021 | TAS | synaptic vesicle |
| GO:0008152 | IEA | metabolic process |
| GO:0030054 | IEA | cell junction |
| GO:0030672 | IEA | synaptic vesicle membrane |
| GO:0032228 | TAS | regulation of synaptic transmission, GABAergic |
| GO:0045202 | IEA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000120638
|
Syn3-001 | protein_coding | Mus_musculus | 0 | 2063 |
|
ENSMUST00000145864
|
Syn3-002 | retained_intron | Mus_musculus | 0 | 1229 |
|
ENSMUST00000139197
|
Syn3-004 | retained_intron | Mus_musculus | 0 | 846 |
|
ENSMUST00000123783
|
Syn3-003 | retained_intron | Mus_musculus | 0 | 846 |
|
ENSMUST00000121789
|
Syn3-005 | protein_coding | Mus_musculus | 0 | 843 |
