C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubby like protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123797 Tulp1-011 ENSMUSG00000037446 10090 - 17:28353062-28359229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartOvaryPlacentaENSMUST00000123797
Transcript ID Adipose Bladder Breast Heart Ovary Placenta
ENSMUST00000123797 0.499±0.09 0.069±0.03 0.099±0.00 0.057±0.00 0.298±0.08 3.518±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002F1 CIL_0002F1_0002 CGP 17:28331671-28365182
CIL_0002F0 CIL_0002F0_0002 CGP 17:28351515-28517524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007602 IMP phototransduction
GO:0008020 IMP G-protein coupled photoreceptor activity
GO:0009584 IMP detection of visible light
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229771 TULP1-003 protein_coding Homo_sapiens 0 723
ENST00000322263 TULP1-004 protein_coding Homo_sapiens 0 723
ENST00000373892 TULP1-002 retained_intron Homo_sapiens 0 412
ENST00000495781 TULP1-007 retained_intron Homo_sapiens 0 281
ENST00000496434 TULP1-006 retained_intron Homo_sapiens 0 361
ENST00000614066 TULP1-201 protein_coding Homo_sapiens 0 723

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