C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002F0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112041-ENSG00000096060 CGP 9606 6:35497874-35728583
GeneTranscriptPositionBiotype
ENSG00000096060 (FKBP5)
FK506 binding protein 5 		ENST00000357266 (FKBP5-001) 35573590-35688937 protein_coding
ENST00000536438 (FKBP5-201) 35573585-35728583 protein_coding
ENST00000539068 (FKBP5-202) 35573585-35688915 protein_coding
ENST00000542713 (FKBP5-203) 35580557-35688942 protein_coding
ENSG00000112041 (TULP1)
tubby like protein 1 		ENST00000229771 (TULP1-003) 35497874-35512938 protein_coding
ENST00000322263 (TULP1-004) 35497874-35512876 protein_coding
ENST00000373892 (TULP1-002) 35503751-35511967 retained_intron
ENST00000428978 (TULP1-001) 35509724-35512866 protein_coding
ENST00000448446 (TULP1-005) 35510706-35512274 retained_intron
ENST00000495781 (TULP1-007) 35500070-35504136 retained_intron
ENST00000496434 (TULP1-006) 35503386-35506018 retained_intron
ENST00000614066 (TULP1-201) 35497877-35512869 protein_coding
ENSG00000212579 (SNORA40)
Small nucleolar RNA SNORA40 		ENST00000391277 (SNORA40.1-208) 35651818-35651945 snoRNA
ENSG00000218749 (RP3-340B19.5)
 ENST00000407266 (RP3-340B19.5-001) 35607628-35607934 processed_pseudogene
ENSG00000219023 (RP3-340B19.2)
 ENST00000403958 (RP3-340B19.2-001) 35555873-35556264 processed_pseudogene
ENSG00000223063 (AL157823.1)
 ENST00000411131 (AL157823.1-201) 35701003-35701138 miRNA
ENSG00000228559 (RP3-340B19.3)
 ENST00000450618 (RP3-340B19.3-001) 35544632-35545669 lincRNA
ENSG00000265527 (MIR5690)
microRNA 5690 		ENST00000583739 (MIR5690-201) 35664717-35664789 miRNA
CIL_0002F0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037446-ENSMUSG00000024222 CGP 10090 17:28351515-28517524
GeneTranscriptPositionBiotype
ENSMUSG00000024222 (Fkbp5)
FK506 binding protein 5 		ENSMUST00000079413 (Fkbp5-001) 28399095-28486149 protein_coding
ENSMUST00000114792 (Fkbp5-004) 28399097-28517524 protein_coding
ENSMUST00000143685 (Fkbp5-003) 28402698-28428629 processed_transcript
ENSMUST00000147716 (Fkbp5-005) 28497343-28507406 retained_intron
ENSMUST00000153744 (Fkbp5-002) 28415961-28441722 protein_coding
ENSMUST00000177939 (Fkbp5-201) 28399105-28517524 protein_coding
ENSMUSG00000037446 (Tulp1)
tubby like protein 1 		ENSMUST00000041819 (Tulp1-001) 28351515-28365148 protein_coding
ENSMUST00000114794 (Tulp1-004) 28355817-28365182 protein_coding
ENSMUST00000123797 (Tulp1-011) 28353062-28359229 protein_coding
ENSMUST00000125876 (Tulp1-006) 28361650-28362957 retained_intron
ENSMUST00000129375 (Tulp1-012) 28351854-28358662 nonsense_mediated_decay
ENSMUST00000130877 (Tulp1-005) 28351515-28355066 retained_intron
ENSMUST00000131604 (Tulp1-010) 28358450-28362432 retained_intron
ENSMUST00000140250 (Tulp1-002) 28352530-28362920 retained_intron
ENSMUST00000142143 (Tulp1-003) 28352538-28356376 retained_intron
ENSMUST00000146493 (Tulp1-009) 28363686-28365139 retained_intron
ENSMUST00000148188 (Tulp1-007) 28351516-28358694 protein_coding
ENSMUST00000150341 (Tulp1-008) 28362695-28365146 retained_intron
ENSMUSG00000088022 (Gm22146)
predicted gene, 22146 		ENSMUST00000157397 (Gm22146-201) 28446861-28447148 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F0_0001ENSG00000096060ENST00000357266ENST00000536438ENST00000539068ENST00000542713ENSG00000112041ENST00000229771ENST00000322263ENST00000373892ENST00000428978ENST00000448446ENST00000495781ENST00000496434ENST00000614066ENSG00000212579ENST00000391277ENSG00000218749ENST00000407266ENSG00000219023ENST00000403958ENSG00000223063ENST00000411131ENSG00000228559ENST00000450618ENSG00000265527ENST00000583739CIL_0002F0_0002ENSMUSG00000024222ENSMUST00000079413ENSMUST00000114792ENSMUST00000143685ENSMUST00000147716ENSMUST00000153744ENSMUST00000177939ENSMUSG00000037446ENSMUST00000041819ENSMUST00000114794ENSMUST00000123797ENSMUST00000125876ENSMUST00000129375ENSMUST00000130877ENSMUST00000131604ENSMUST00000140250ENSMUST00000142143ENSMUST00000146493ENSMUST00000148188ENSMUST00000150341ENSMUSG00000088022ENSMUST00000157397
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F0_0001ENSG00000096060ENST00000357266ENST00000536438ENST00000542713ENSG00000112041ENST00000229771ENST00000322263ENST00000373892ENST00000428978ENST00000495781ENST00000496434ENST00000614066ENSG00000212579ENST00000391277ENSG00000218749ENST00000407266ENSG00000219023ENST00000403958ENSG00000223063ENST00000411131ENSG00000228559ENST00000450618ENSG00000265527ENST00000583739CIL_0002F0_0002ENSMUSG00000024222ENSMUST00000079413ENSMUST00000114792ENSMUST00000143685ENSMUST00000147716ENSMUSG00000037446ENSMUST00000041819ENSMUST00000114794ENSMUST00000123797ENSMUST00000125876ENSMUST00000129375ENSMUST00000130877ENSMUST00000131604ENSMUST00000140250ENSMUST00000142143ENSMUST00000148188ENSMUSG00000088022ENSMUST00000157397
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096060 ENST00000357266 97.914±0.00 32.827±0.00 2.102±0.00 17.969±17.13 12.573±4.28 25.892±22.44 46.970±45.91 92.379±73.21 45.403±33.22 9.823±4.78 82.626±61.85 11.675±5.56 13.430±3.47 24.837±8.31
ENST00000536438 N/A N/A N/A 0.646±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542713 N/A N/A N/A N/A 1.432±0.00 N/A 0.334±0.00 1.574±0.00 2.516±0.00 3.043±0.00 N/A N/A N/A N/A
ENSG00000112041 ENST00000229771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00
ENST00000322263 0.040±0.00 0.019±0.00 N/A N/A 0.017±0.00 0.092±0.00 N/A N/A N/A N/A 0.082±0.00 0.083±0.00 0.066±0.05 0.154±0.00
ENST00000373892 N/A 0.039±0.00 N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.374±0.00 N/A N/A
ENST00000428978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A
ENST00000448446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495781 N/A 0.077±0.00 N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A 0.288±0.00
ENST00000496434 N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.302±0.00 0.501±0.00 N/A N/A
ENST00000614066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.430±0.00 0.012±0.00 N/A
ENSG00000212579 ENST00000391277 0.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218749 ENST00000407266 0.479±0.00 N/A N/A 0.253±0.00 N/A N/A 0.351±0.00 0.353±0.05 0.650±0.00 N/A 0.133±0.00 0.882±0.00 N/A N/A
ENSG00000219023 ENST00000403958 0.042±0.00 0.089±0.00 N/A N/A N/A 0.042±0.00 N/A 0.091±0.00 N/A 0.043±0.00 0.307±0.00 0.101±0.01 0.195±0.11 0.108±0.01
ENSG00000223063 ENST00000411131 N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000228559 ENST00000450618 0.136±0.00 N/A N/A N/A N/A 1.404±0.00 N/A N/A N/A 0.092±0.00 N/A 0.060±0.00 0.371±0.00 0.265±0.00
ENSG00000265527 ENST00000583739 N/A 4.510±0.00 N/A 0.382±0.00 N/A N/A 0.677±0.00 N/A 0.309±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024222 ENSMUST00000079413 3.084±0.66 17.633±8.68 6.502±1.26 9.462±2.38 7.508±3.61 40.687±8.11 1.799±0.95 6.814±0.40 10.227±5.14 5.364±2.13 9.691±5.77 95.732±21.31 8.929±4.01 5.897±2.16
ENSMUST00000114792 N/A N/A N/A N/A 0.556±0.00 N/A N/A N/A N/A N/A N/A 29.028±7.94 N/A 2.431±0.00
ENSMUST00000143685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 134.299±3.81 N/A N/A
ENSMUST00000147716 N/A N/A N/A N/A 0.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037446 ENSMUST00000041819 N/A 0.059±0.00 0.039±0.00 N/A N/A N/A N/A N/A 0.019±0.01 N/A N/A 0.569±0.04 N/A N/A
ENSMUST00000114794 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.322±0.00 N/A 0.093±0.00
ENSMUST00000123797 0.499±0.09 N/A 0.069±0.03 N/A 0.099±0.00 N/A 0.057±0.00 N/A N/A N/A N/A 0.298±0.08 3.518±0.00 N/A
ENSMUST00000125876 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A 0.107±0.00
ENSMUST00000129375 N/A 0.253±0.16 0.136±0.00 N/A 0.222±0.00 0.126±0.00 0.068±0.00 0.115±0.02 0.146±0.05 N/A N/A 1.056±0.29 8.765±0.70 0.057±0.02
ENSMUST00000130877 N/A 0.055±0.00 0.034±0.00 0.061±0.00 0.053±0.01 0.041±0.00 N/A 0.018±0.00 N/A N/A N/A 0.213±0.07 N/A 0.042±0.00
ENSMUST00000131604 0.266±0.00 N/A N/A 0.425±0.00 N/A 0.227±0.07 0.082±0.00 N/A 0.123±0.00 N/A 0.175±0.00 1.125±0.18 N/A N/A
ENSMUST00000140250 0.028±0.00 N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.154±0.11 N/A 0.064±0.00
ENSMUST00000142143 N/A 0.042±0.00 N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A 0.239±0.05 N/A N/A
ENSMUST00000146493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148188 0.490±0.12 0.121±0.04 0.164±0.01 0.331±0.05 0.367±0.14 0.200±0.09 0.072±0.02 0.032±0.01 0.082±0.03 1.927±0.44 0.085±0.00 0.877±0.37 17.411±14.91 0.064±0.02
ENSMUST00000150341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088022 ENSMUST00000157397 N/A 0.744±0.41 N/A N/A 1.021±0.77 N/A N/A 0.208±0.00 0.378±0.33 N/A N/A 1.248±0.92 0.157±0.00 0.816±0.25

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