C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic polyadenylation element binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124158 Cpeb3-008 ENSMUSG00000039652 10090 - 19:37021297-37174095 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124158
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124158 0.589±0.14 0.979±0.05 1.287±0.00 0.615±0.00 4.359±0.74 4.267±2.37 0.487±0.12 0.803±0.10 6.791±1.63 1.448±0.85 0.245±0.03 0.500±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018R CIL_00018R_0002 CGP 19:36926079-37208601
CIL_00018Q CIL_00018Q_0002 CGP 19:37021291-37222139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IDA RNA binding
GO:0017148 IMP negative regulation of translation
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115341 protein_coding Danio_rerio 0 309
ENST00000265997 CPEB3-002 protein_coding Homo_sapiens 0 3007
ENST00000412050 CPEB3-001 protein_coding Homo_sapiens 0 2702
ENST00000614585 CPEB3-201 protein_coding Homo_sapiens 0 3007

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