C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, AMPA3 (alpha 3)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124169 Gria3-007 ENSMUSG00000001986 10090 + X:41402740-41478661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryTestisENSMUST00000124169
Transcript ID Colon Heart Ovary Testis
ENSMUST00000124169 1.833±0.06 1.130±0.00 6.181±0.00 1.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U7 CIL_0001U7_0002 CGP X:41400854-41920674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004971 IBA alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0030425 IBA dendrite
GO:0032281 IDA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0045211 IBA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000479118 GRIA3-004 processed_transcript Homo_sapiens 0 412
ENST00000541091 GRIA3-002 protein_coding Homo_sapiens 0 412
ENST00000611689 GRIA3-006 protein_coding Homo_sapiens 0 252
ENST00000616590 GRIA3-007 protein_coding Homo_sapiens 0 252
ENST00000620443 GRIA3-001 protein_coding Homo_sapiens 0 412
ENST00000620581 GRIA3-201 protein_coding Homo_sapiens 0 412
ENST00000622768 GRIA3-202 protein_coding Homo_sapiens 0 412

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