C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124482 Mrpl17-001 ENSMUSG00000030879 10090 - 7:105806658-105811099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124482
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124482 6.589±0.73 14.088±4.12 2.375±0.14 2.444±1.44 7.160±2.74 10.013±2.25 3.448±0.36 5.411±1.31 5.178±2.30 5.940±0.49 1.910±0.39 8.748±4.27 2.695±2.36 1.713±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VT CIL_0003VT_0002 CGP 7:105752989-105811099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000002 TAS mitochondrial genome maintenance
GO:0003735 ISA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005762 ISA mitochondrial large ribosomal subunit
GO:0006412 ISA translation
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000288937 MRPL17-001 protein_coding Homo_sapiens 0 551
ENST00000529958 MRPL17-002 retained_intron Homo_sapiens 0 372

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