C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124490 Arhgap27-007 ENSMUSG00000034255 10090 - 11:103337777-103339303 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S1 CIL_0002S1_0002 CGP 11:103219762-103363692
CIL_0004D9 CIL_0004D9_0003 CGP 11:103331497-103412687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376922 ARHGAP27-001 protein_coding Homo_sapiens 0 250
ENST00000428638 ARHGAP27-202 protein_coding Homo_sapiens 0 250
ENST00000524404 ARHGAP27-005 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000526484 ARHGAP27-007 retained_intron Homo_sapiens 0 263
ENST00000528384 ARHGAP27-006 protein_coding Homo_sapiens 0 250
ENST00000529357 ARHGAP27-002 retained_intron Homo_sapiens 0 252
ENST00000531735 ARHGAP27-010 retained_intron Homo_sapiens 2.94273e-44 185
ENST00000532038 ARHGAP27-003 protein_coding Homo_sapiens 0 252
ENST00000532667 ARHGAP27-008 retained_intron Homo_sapiens 0 241
ENST00000532891 ARHGAP27-009 protein_coding Homo_sapiens 0 252
ENST00000582826 ARHGAP27-013 processed_transcript Homo_sapiens 1e-32 143
ENST00000610792 ARHGAP27-203 protein_coding Homo_sapiens 0 250
ENST00000612916 AC217778.3-202 protein_coding Homo_sapiens 0 250
ENST00000616021 ARHGAP27-205 protein_coding Homo_sapiens 0 250
ENST00000618949 AC217778.3-201 protein_coding Homo_sapiens 0 250

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