C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000529357 ARHGAP27-002 ENSG00000159314 9606 - 17:45397514-45410386 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000529357
Transcript ID Lung Ovary
ENST00000529357 1.768±0.00 10.459±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S1 CIL_0002S1_0001 CGP 17:45263121-45434421
CIL_0004D9 CIL_0004D9_0002 CGP 17:45393902-45490749

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041385 Arhgap27-005 protein_coding Mus_musculus 0 1123
ENSMUST00000107024 Arhgap27-001 protein_coding Mus_musculus 0 1064
ENSMUST00000116102 Arhgap27-011 retained_intron Mus_musculus 0 704
ENSMUST00000139830 Arhgap27-006 retained_intron Mus_musculus 0 693
ENSMUST00000136491 Arhgap27-004 protein_coding Mus_musculus 0 494
ENSMUST00000124490 Arhgap27-007 retained_intron Mus_musculus 0 252

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