C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YTH domain family 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124666 Ythdf1-003 ENSMUSG00000038848 10090 - 2:180911768-180920387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000124666
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000124666 14.313±0.00 20.289±2.91 17.058±7.49 12.932±0.00 6.504±0.57 9.711±1.25 10.809±1.99 13.628±1.01 16.452±1.88 5.491±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O2 CIL_0001O2_0002 CGP 2:180774381-180920949
CIL_0001NY CIL_0001NY_0002 CGP 2:180904377-180934010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370334 YTHDF1-002 protein_coding Homo_sapiens 5e-40 169
ENST00000370339 YTHDF1-001 protein_coding Homo_sapiens 0 697
ENST00000515217 YTHDF1P1-001 processed_pseudogene Homo_sapiens 0 466

Loading