C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | splicing factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000124667  |
Sf1-014 |
ENSMUSG00000024949 |
10090 | + |
19:6374010-6376512  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001YW | CIL_0001YW_0002 | CGP | 19:6363690-6398459 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | ISS | nucleus |
| GO:0005737 | ISS | cytoplasm |
| GO:0030238 | IGI | male sex determination |
| GO:0033327 | IGI | Leydig cell differentiation |
| GO:0050810 | IGI | regulation of steroid biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000227503
|
SF1-002 | protein_coding | Homo_sapiens | 0 | 1068 |
|
ENST00000334944
|
SF1-001 | protein_coding | Homo_sapiens | 0 | 717 |
|
ENST00000377387
|
SF1-006 | protein_coding | Homo_sapiens | 0 | 1068 |
|
ENST00000377390
|
SF1-005 | protein_coding | Homo_sapiens | 0 | 717 |
|
ENST00000377394
|
SF1-004 | protein_coding | Homo_sapiens | 0 | 1105 |
|
ENST00000413725
|
SF1-019 | protein_coding | Homo_sapiens | 0 | 388 |
|
ENST00000433274
|
SF1-016 | protein_coding | Homo_sapiens | 0 | 717 |
|
ENST00000443908
|
SF1-014 | protein_coding | Homo_sapiens | 0 | 1234 |
|
ENST00000448404
|
SF1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1105 |
|
ENST00000477596
|
SF1-015 | retained_intron | Homo_sapiens | 0 | 403 |
|
ENST00000486867
|
SF1-020 | protein_coding | Homo_sapiens | 0 | 673 |
