C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124869 Ccdc43-003 ENSMUSG00000020925 10090 - 11:102686340-102697536 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000124869
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000124869 23.154±0.00 36.407±0.00 27.993±1.14 30.579±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0003CO CIL_0003CO_0002 CGP 11:102663716-102697782

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315286 CCDC43-001 protein_coding Homo_sapiens 0 219
ENST00000457422 CCDC43-003 protein_coding Homo_sapiens 0 481
ENST00000472403 C17orf104-003 nonsense_mediated_decay Homo_sapiens 7e-33 147
ENST00000588210 CCDC43-002 protein_coding Homo_sapiens 0 219
ENST00000588805 C17orf104-007 processed_transcript Homo_sapiens 4e-34 148

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