C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fancd2 opposite strand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125139 Fancd2os-002 ENSMUSG00000033963 10090 - 6:113596761-113600715 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleTestisENSMUST00000125139
Transcript ID Kidney Muscle Testis
ENSMUST00000125139 0.445±0.19 0.064±0.00 12.165±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D5 CIL_0002D5_0002 CGP 6:113514874-113597017
CIL_00059I CIL_00059I_0002 CGP 6:113531682-113600715
CIL_00059J CIL_00059J_0002 CGP 6:113596761-113616948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000450660 FANCD2OS-002 protein_coding Homo_sapiens 0 634
ENST00000453223 FANCD2OS-006 protein_coding Homo_sapiens 0 228
ENST00000524279 FANCD2OS-001 protein_coding Homo_sapiens 0 634

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